Scientific facilities
Bioinformatics
Facility Head
David Abia
Scientific Lead
Ugo Bastolla
Contact details
91 196 46 34
ub (at) cbm.uam.es
The Bioinformatics facility provides support to the CBM research groups by performing bioinformatics analyses, advising on the computational aspects of research projects and organizing courses. It also manages the scientific computing resources of the CBM both at hardware and software level. Its expertise is focused on the analysis and modeling of protein structure, evolution and dynamic properties.
Linux stations
The aim of these stations is to offer a functional work space with the necessary tools for data analysis and visualisation of results, as well as new tool development.
Stations: 2
Specifications:
* CPU: Intel(R) Core(TM)2 Quad CPU Q6600 @ 2.40GHz
* RAM: 6GB
* HDD: 250GB
* Graphics: Intel Corporation 82Q35 Express Integrated Graphics Controller
* OS: CentOS 7
Linux stations
The aim of these stations is to offer a functional work space with the necessary tools for data analysis and visualisation of results, as well as new tool development.
Stations: 2
Specifications:
* CPU: Intel(R) Core(TM)2 Quad CPU Q6600 @ 2.40GHz
* RAM: 6GB
* HDD: 250GB
* Graphics: Intel Corporation 82Q35 Express Integrated Graphics Controller
* OS: CentOS 7
Computing cluster
Stations: 1
Compute nodes:
OS: CentOS 6.5
Number of nodes: 40
Number of cores: 664
Number of GPU’s: 8
Data capacity: 60 TB
Average local data capacity: 180 GB/node
Specifics compute node:
polifemo1.cbm.uam.es
CPU: AMD Opteron(tm) Processor 6128 (2GHz)
RAM: 64GB
SSD: 250GB
OS: CentOS 7
Staff
David Angel Abia Holgado
Lab.: 313.2 Ext.: 4634
dabia(at)cbm.csic.es
Judith Maestro Ciria
Lab.: 313 Ext.: 4634